Package: fluoSurv 1.0.0

fluoSurv: Estimate Insect Survival from Fluorescence Data

Use spectrophotometry measurements performed on insects as a way to infer pathogens virulence. Insect movements cause fluctuations in fluorescence signal, and functions are provided to estimate when the insect has died as the moment when variance in autofluorescence signal drops to zero. The package provides functions to obtain this estimate together with functions to import spectrophotometry data from a Biotek microplate reader. Details of the method are given in Parthuisot et al. (2018) <doi:10.1101/297929>.

Authors:Jean-Baptiste Ferdy <[email protected]>

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fluoSurv.pdf |fluoSurv.html
fluoSurv/json (API)

# Install 'fluoSurv' in R:
install.packages('fluoSurv', repos = c('https://jferdy.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Datasets:
  • galleria - Fluorescence data measured on _Galleria mellonella_
  • setup - An injection experimental setup

On CRAN:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

5 exports 0.00 score 0 dependencies 3 scripts 136 downloads

Last updated 6 years agofrom:e31dc96fd8. Checks:OK: 7. Indexed: yes.

TargetResultDate
Doc / VignettesOKAug 20 2024
R-4.5-winOKAug 20 2024
R-4.5-linuxOKAug 20 2024
R-4.4-winOKAug 20 2024
R-4.4-macOKAug 20 2024
R-4.3-winOKAug 20 2024
R-4.3-macOKAug 20 2024

Exports:estimate.LTestimate.offsetextract.wellread.kineticwhen.threshold

Dependencies: